簡易檢索 / 詳目顯示

研究生: 林勇義
Giyanto - Wijaya Salim
論文名稱: Facile Hydrophobic Modification of Alginate by using Paper Sizing Agent Alkyl Ketene Dimer (AKD) for Enzyme Immobilization and Refolding
Facile Hydrophobic Modification of Alginate by using Paper Sizing Agent Alkyl Ketene Dimer (AKD) for Enzyme Immobilization and Refolding
指導教授: 李振綱
Cheng-kang Lee
口試委員: 劉懷勝
Hwai-shen Liu
王孟菊
Meng-jiy Wang
學位類別: 碩士
Master
系所名稱: 工程學院 - 化學工程系
Department of Chemical Engineering
論文出版年: 2010
畢業學年度: 98
語文別: 英文
論文頁數: 92
中文關鍵詞: alginatealkyl ketene dimerD-hydantoinaseprotein refoldinghydrophobic modification
外文關鍵詞: alginate, alkyl ketene dimer, D-hydantoinase, protein refolding, hydrophobic modification
相關次數: 點閱:149下載:0
分享至:
查詢本校圖書館目錄 查詢臺灣博碩士論文知識加值系統 勘誤回報

As the sustainable developments were demanded, the research in bio-based materials needs to be conducted. Alginate, as one of the biopolymers, offers not only the benefit of other bio-based material, but also the ability to be employed in the protein immobilization. In order to increase the stability of the alginate as the protein immobilization support, a paper sizing agent, alkyl ketene dimer (AKD), had been grafted to the alginate. The hydrophobic modification process involved an alginate-AKD emulsification, solvent exchange, and extraction of the unreacted AKD. The analyses on the swelling kinetics, protein release, FTIR, and water contact angle showed the increased hydrophobicity of the AKD-modified alginate. To obtain the high hydrophobically modified alginate, 25% AKD concentration at the reaction temperature of 50°C had been employed. At this condition, the water contact angle rose to 93.8°, as well as the swelling ratio decreased to 1.13. The hydrophobic properties of the alginate-AKD enabled the application of the alginate on the protein refolding. The protein refolding was performed by complex precipitation and bead-dialysis methods using D-hydantoinase as the model protein. The enzymatic activity was regained after the refolding by using both of the two mentioned methods.


As the sustainable developments were demanded, the research in bio-based materials needs to be conducted. Alginate, as one of the biopolymers, offers not only the benefit of other bio-based material, but also the ability to be employed in the protein immobilization. In order to increase the stability of the alginate as the protein immobilization support, a paper sizing agent, alkyl ketene dimer (AKD), had been grafted to the alginate. The hydrophobic modification process involved an alginate-AKD emulsification, solvent exchange, and extraction of the unreacted AKD. The analyses on the swelling kinetics, protein release, FTIR, and water contact angle showed the increased hydrophobicity of the AKD-modified alginate. To obtain the high hydrophobically modified alginate, 25% AKD concentration at the reaction temperature of 50°C had been employed. At this condition, the water contact angle rose to 93.8°, as well as the swelling ratio decreased to 1.13. The hydrophobic properties of the alginate-AKD enabled the application of the alginate on the protein refolding. The protein refolding was performed by complex precipitation and bead-dialysis methods using D-hydantoinase as the model protein. The enzymatic activity was regained after the refolding by using both of the two mentioned methods.

ABSTRACT ii 碩士學位論文指導教授推薦書 iii 碩士學位考試委員審定書 iv 誌謝 v TABLE OF CONTENTS vi LIST OF FIGURES viii LIST OF TABLES x CHAPTER I INTRODUCTION 1 I.1. Background 1 I.2. Objectives 3 I.3. Thesis Organization 3 CHAPTER II LITERATURE REVIEW 5 II.1. Hydrophobically Modified Alginate (HMA) 5 II.2. Alkyl Ketene Dimers (AKD) 7 II.3. D-hydantoinase 10 II.4. Immobilization of Enzyme in the Hydrophobically Modified Alginate 17 II.5. Protein Refolding 21 II.5.1. Refolding by Dilution 22 II.5.2. On-column Refolding 22 II.5.3. Alginates as Protein Refolding Agent 23 II.5.4. Analytical Methods for Refolding 25 CHAPTER III METHODOLOGY 26 III.1. Materials 26 III.2. Equipments 28 III.3. Experimental Methods 29 III.3.1. Media and Stock Solution Preparations 31 III.3.2. Preparation of AKD-Modified Alginate 34 III.3.3. Growing the Culture of Escherichia coli Expressing EGFP 35 III.3.4. Growing The Culture of Escherichia coli pET-Ch-HDT Culture 36 III.3.5. Isolation and Solubilization of Inclusion Bodies 36 III.3.6. Immobilized Metal-ions Affinity Chromatography (IMAC) 37 III.3.7. Protein Refolding 38 III.3.8. Analyses 41 CHAPTER IV RESULTS AND DISCUSSION 47 IV.1. Fourier Transform Infra Red (FTIR) Spectra of Sodium Alginate 47 IV.2. Effect of Temperature on the Preparation of Alginate-AKD 54 IV.3. Effect of AKD Concentration on the Preparation of Alginate-AKD 56 IV.4. Optimum Condition for Alginate Modification 59 IV.5. Protein Refolding 66 IV.5.1. On-column Refolding 67 IV.5.2. Complex Precipitation Refolding 69 IV.6. Bead-dialysis Refolding 73 CHAPTER V CONCLUSION & RECOMMENDATION 76 V.1. Conclusion 76 V.2. Recommendation 77 REFERENCES 78 國立臺灣科技大學博碩士論文授權書 82

Ahmad, A. L., P. C. Oh and S. R. A. Shukor (2009) Sustainable Biocatalytic Synthesis of L-homophenylalanine as Pharmaceutical Drug Precursor. Biotechnology Advances. 27, 286-296.

Akiyoshi, K., Y. Sasaki and J. Sunamoto (1999) Molecular Chaperone-Like Activity of Hydrogel Nanoparticles of Hydrophobized Pullulan: Thermal Stabilization with Refolding of Carbonic Anhydrase B. Bioconjugate Chemistry. 10, 321-324.

Aranaz, I., N. Acosta and A. Heras (2006) Synthesis of p-hydroxyphenylglycine by cell extract from Agrobacterium radiobacter encapsulated in alginate capsules. Enzyme and Microbial Technology. 39, 215-221.

Arcuri, M. B., S. J. Sabino, O. A. C. Antunes and E. G. Oestreicher (2002) Kinetic study and production of N-carbamoyl-D-phenylglycine by immobilized D-hydantoinase from Vigna angularis. Catalysis Letters. 79, 17-19.

Bolivar, A. I., R. A. Venditti, J. J. Pawlak and K. El-Tahlawy (2007) Development and characterization of novel starch and alkyl ketene dimer microcellular foam particles. Carbohydrate Polymers. 69, 262-271.

Bommarius, A. S. and B. R. Riebel (2004) Biocatalyst: Fundamental and Applications, Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, Germany

Cheon, Y.-H., H.-S. Park, S.-C. Lee, D.-E. Lee and H.-S. Kim (2003) Structure-based mutational analysis of the active site residues of d-hydantoinase. Molecular Catalysis B: Enzymatic. 26, 217-222.

Chien, H. R., Y.-L. Jih, W.-Y. Yang and W.-H. Hsu (1998) Identification of the open reading frame for the Pseudomonas putida D-hydantoinase gene and expression of the gene in Escherichia coli. Biochimica et Biophysica Acta. 1395, 68-77.

El-Tahlawy, K., R. Venditti and J. Pawlak (2008) Effect of alkyl ketene dimer reacted starch on the properties of starch microcellular foam using a solvent exchange technique. Carbohydrate Polymers. 73, 133-142.

Garnier, G., J. Wright, L. Godbout and L. Yu (1998) Wetting mechanism of alkyl ketene dimers on cellulose films. Colloids and Surfaces A: Physicochemical and Engineering Aspects. 145, 153-165.

GE-Life-Sciences (1999) Rapid and efficient purification and refolding of a (His)6-tagged recombinant protein produced in E. coli as inclusion bodies, pp 1-4 Tokyo

Gemeiner, P., L. Revoxa-Benkova, F. Svec and O. Norrlow (1994) Natural and Synthetic Carriers Suitable for Immobilization of Viable Cells, Active Organelles, and Molecules. Immobilized Biosystems: Theory and Practical Applications. Veliky, I. A. and McLean, R. J. C. (eds.), pp 1-108, Blackie Academic & Professional Glasgow

Gerhartz, W. (1990) Enzyme in Industry: Production and Application, VCH Publisher, New York

Gray, C. J. and K. Philp (1991) Morpholine-Induced Gel Formation with Propylene Glycol Alginate Solutions. Carbohydrate Polymers. 15, 283-297.

Gupta, M. N. (1996) Critical review: affinity precipitation of proteins. Journal of Molecular Recognition. 9, 356-359.

Han, J., A.-S. Guenier, S. p. Salmieri and M. Lacroix (2008) Alginate and Chitosan Functionalization for Micronutrient Encapsulation. Journal of Agricultural and Food Chemistry. 56, 2528-2535.

Incani, V., A. Lavasanifarab and H. Uludag (2010) Lipid and hydrophobic modification of cationic carriers on route to superior gene vectors. Soft Matter. 6, 2124-2138.

Junter, G. A. and F. Vinet (2009) Compressive properties of yeast cell-loaded Ca-alginate hydrogel layers: Comparison with alginate-CaCO3 microparticle composite gel structures. Chemical Engineering Journal. 145, 514-521.

Karademir, A. (2002) Quantitative determination of alkyl ketene dimer (AKD) retention in paper made on a pilot paper machine. Turk. J. Agri. For. 26, 253-260.

Katona, J. M., V. J. Sovilj and L. B. Petrovic (2010) Microencapsulation of oil by polymer mixture-ionic surfactant interaction induced coacervation. Carbohydrate Polymers. 79, 563-570.

Khodagholi, F., B. Eftekharzadeh and R. Yazdanparast (2008) A new artificial chaperone for protein refolding: sequential use of detergent and alginate. Protein J. 27, 123-129.

Laslo, A. C., E. Ganea and C. Obinger (2009) Refolding of hexameric porcine leucine aminopeptidase using a cationic detergent and dextrin-10 as artificial chaperones. Journal of Biotechnology. 140, 162-168.

Leal, D., B. Matsuhiro, M. Rossi and F. Caruso (2008) FT-IR spectra of alginic acid block fractions in three species of brown seaweeds. Carbohydrate Research. 343, 308-316.

Lee, M., H. Gwak, B. Park and S.-T. Lee (2005) Synthesis of mycolic acid biosurfactants and their physical and surface-active properties. Journal of the American Oil Chemists' Society. 82, 181-188.

Leonard, M., M. R. De Boisseson, P. Hubert, F. Dalencon and E. Dellacherie (2004) Hydrophobically modified alginate hydrogels as protein carriers with specific controlled release properties. Journal of Controlled Release. 98, 395-405.

Lindfors, J., J. Salmi, J. Laine and P. Stenius (2007) AKD and ASA model surfaces: preparation and characterization. Bioresources. 2, 652-670.

Martinez-Rodriguez, S., L. A. Gonzalez-Ramirez, J. M. Clemente-Jimenez, F. Rodriguez-Vico, F. J. L. Heras-Vazquez, J. A. Gavira and J. M. Garcia-Ruiz (2006) Crystallization and preliminary crystallographic studies of the recombinant dihydropyrimidinase from Sinorhizobium meliloti CECT4114. Acta Crystallogr Sect F Struct Biol Cryst Commun. 6, 1223-1226.

May, O., P. T. Nguyen and F. H. Arnold (2000) Inverting enantioselectivity by directed evolution of hydantoinase for improved production of L-methionine. Nature America Inc. 18, 317-320.

McHugh, D. J. (2003) A guide to seaweed industry, Food and Agriculture Organization Rome

Middelberg, A. P. J. (2002) Preparative protein refolding. TRENDS in Biotechnology. 20, 437-443.

Mondal, K., H. B. Bohidar, R. P. Roy and M. N. Gupta (2006a) Alginate-chaperoned facile refolding of Chromobacterium viscosum lipase. Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics. 1764, 877-886.

Mondal, K., S. Raghava, B. Barua, R. Varadarajan and M. N. Gupta (2006b) Role of Stimuli-Sensitive Polymers in Protein Refolding: α-Amylase and CcdB (Controller of Cell Division or Death B) as Model Proteinsa€ Langmuir. 23, 70-75.

Nomura, Y., M. Ikeda, N. Yamaguchi, Y. Aoyama and K. Akiyoshi (2003) Protein refolding assisted by self-assembled nanogels as novel artificial molecular chaperone. FEBS Letters. 553, 271-276.

Nyarku, S. and B. B. Sithole (1994) Analysis of alkyl ketene dimer (AKD) by potentiometric titration. Can. J. Chem. 72, 274-278.

Ogawa, J. and S. Shimizu (2000) Stereoselective Biocatalysis. Stereoselective Synthesis using Hydantoinases and Carbamoylases. Patel, R. N. (ed.), Marcel Dekker, Inc. New York

Papageorgiou, S. K., E. P. Kouvelos, E. P. Favvas, A. A. Sapalidis, G. E. Romanos and F. K. Katsaros (2010) Metal-carboxylate interactions in metal-alginate complexes studied with FTIR spectroscopy. Carbohydrate Research. 345, 469-473.

Qiao, L., Q.-M. Gu and H. N. Cheng (2006) Enzyme-catalyzed synthesis of hydrophobically modified starch. Carbohydrate Polymers. 66, 135-140.

Sakugawa, K., A. Ikeda, A. Takemura and H. Ono (2004) Simplified Method for Estimation of Composition of Alginates by FTIR. Applied Polymer Science. 93, 1372-1377.

Sartori, C., D. S. Finch, B. Ralph and K. Gilding (1997) Determination of the cation content of alginate thin films by FTi.r. spectroscopy. Polymer. 38, 43-51.
Sawada, S.-I., Y. Nomura, Y. Aoyama and K. Akiyoshi (2006) Heat Shock Protein-like Activity of a Nanogel Artificial Chaperone for Citrate Synthase. Bioactive and Compatible Polymers. 21, 487-501.

Scheer, M. (2009) BRENDA: The Comprehensive Enzyme Information System (3.5.2.2)

Sharma, A., S. Sharma and M. N. Gupta (2000) Purification of Wheat Germ Amylase by Precipitation. Protein Expression and Purification. 18, 111-114.

Sharma, R. and R. M. Vohra (1999) Microbial transformations: Production of D-amino acids using hydantoinase. Current Science. 76, 127-136.

Sharma, S. and M. N. Gupta (2001) Alginate as a macroaffinity ligand and an additive for enhanced activity and thermostability of lipases. Biotechnol. Appl. Biochem. 33, 161-165.

Sheldon, R. A. (2007) Enzyme Immobilization: The Quest for Optimum Performance. Adv. Synth. Catal. 349, 1289-1307.

Sigma-Aldrich (1997) Enzymatic assay of D-Hydantoinase (EC 3.5.22) Ottawa

Sikorski, P., F. Mo, G. Skjak-Braek and B. T. Stokke (2007) Evidence for Egg-Box-Compatible Interactions in Calcium Alginate Gels from Fiber X-ray Diffraction. Biomacromolecules. 8, 2098-2103.

Worsfold, P. J. (1995) Classification and Chemical Characteristics of Immobilized Enzymes. Pure & Appl. Chem. 67, 597-600.

Xu, Z., Y. Liu, Y. Yang, W. Jiang, E. Arnold and J. Ding (2003) Crystal Structure of D-Hydantoinase from Burkholderia pickettii at a Resolution of 2.7 Angstroms: Insights into the Molecular Basis of Enzyme Thermostability. Bacteriology. 185, 4038-4049.

Yao, B., C. Ni, C. Xiong, C. Zhu and B. Huang (2010) Hydrophobic modification of sodium alginate and its application in drug controlled release. Bioprocess and Biosystems Engineering. 33, 457-463.

Yoshimoto, N., T. Hashimoto, M. M. Felix, H. Umakoshi and R. Kuboi (2003) Artificial Chaperone-Assisted Refolding of Bovine Carbonic Anhydrase Using Molecular Assemblies of Stimuli-Responsive Polymers. Biomacromolecules. 4, 1530-1538.

QR CODE