研究生: |
賴銀德 Yin-De Lai |
---|---|
論文名稱: |
檢測真菌、革蘭氏陽性與陰性菌之紫膜生物光電晶片之開發 Development of purple membrane-based photoelectric chips to detect Fungi, Gram-negative and Gram-positive bacteria detection |
指導教授: |
陳秀美
Hsiu-Mei Chen |
口試委員: |
陳秀美
Hsiu-Mei Chen 林景堉 Ching-Yu Lin 張哲菖 Chang-Che Chang 吳雪霞 Hsueh-Hsia Wu 葉旻鑫 Min-Hsin Yeh |
學位類別: |
碩士 Master |
系所名稱: |
工程學院 - 化學工程系 Department of Chemical Engineering |
論文出版年: | 2019 |
畢業學年度: | 107 |
語文別: | 中文 |
論文頁數: | 116 |
中文關鍵詞: | 光電晶片 、菌血症 |
外文關鍵詞: | bacteremia, biosensor |
相關次數: | 點閱:252 下載:0 |
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菌血症患者若不盡早治療,可能造成急性多器官轉移性感染,具有高危險性。因此在感染初期必須立即分辨是真菌、革蘭氏陽性菌或革蘭氏陰性菌,可縮小藥物選擇範圍而有效治療,並可避免因錯用抗生素而造成抗藥性。古生嗜鹽菌Halobacterium salinarum之紫色細胞膜 (purple membrane, PM) 含有細菌視紫質(bacteriorhodopsin, BR),為一種光驅動質子泵浦,被光照射後可將質子由PM膜內側推向外側,造成質子梯度而產生光電流。利用PM膜光電流與入射光強度呈正相關,以及利用菌體本身可散射光之特性,我們先前已製備出一系列以PM為基礎之微生物光電晶片。本論文分為四部分,第一部分製作可捕捉真菌之核酸適體-PM複合晶片上,並探討晶片製程與最適化檢測條件。第二部分為使用可辨認脂磷壁酸 (lipoteichoic acid) 的抗體,進行可捕捉革蘭氏陽性菌之抗體-PM複合晶片之開發。第三部分則利用可辨認脂多醣 (lipopolysaccharide) 之抗體,開發可檢測革蘭氏陰性菌之免疫檢測晶片。最後,則以這三種晶片針對台灣常見之七種菌血症菌株進行檢測,結果發現,所開發晶片均可有效區分菌種類別。本研究所新開發的微生物感測晶片具有直接檢測、快速與高靈敏度之諸多優點,未來可應用於快速篩檢。
Untreated bacteremia patients are at high risk of developing acute multiple-organ metastatic infection. Early identification of infectious microorganisms as fungus, gram-negative bacteria, or gram-positive bacteria help narrow the antibiotics treatment, and avoid the development of antibiotic resistance. Halobacterium salinarum purple membrane (PM) contain bacteriorhodopsin, a light-driven proton pump able to transport protons across PM upon illumination and subsequently generate photocurrents. According to the linear dependence of PM photocurrents on illumination intensities, we had developed a series of different PM-based biosensors. This thesis comprises four parts. First, a PM chip coated with chitin-aptamers to detect fungi with optimization investigation. Secondly, antibodies against lipoteichoic acid (LTA) were immobilized on a PM chip to capture gram-positive bacteria. Thirdly, another immunosensing PM-based chip was constructed with antibodies against lipopolysaccharide (LPS) to recognize gram-negative bacteria. Finally, the performance of those three chips were investigated with seven bacteremia strains most commonly prevalent in Taiwan, demonstrating their differential recognition ability among fungi, gram-negative bacteria, and gram-positive bacteria. The newly developed PM-based bacteremia biosensor has the advantages of direct and fast detection with high sensitivity, and can be applied to rapid screening in the future.
Bratanov MS. Expression, Purification, and Crystallization of Bacteriorhodopsin and Its Derivatives. Doctor of Natural Sciences. 2014.
Berezina, N. Production and application of chitin. Physical Sciences Reviews 2016, 1.
Chen HM, Lin CJ, Jheng KR, Kosasih A, Chang JY. Effect of graphene oxide on affinity-immobilization of purple membranes on solid supports. Colloids Surf B Biointerfaces. 2014, 116:482-488.
Chen HM, Jheng KR, Yu AD. Direct, label-free, selective, and sensitive microbial detection using a bacteriorhodopsin-based photoelectric immunosensor. Biosens Bioelectron. 2017, 91:24-31.
Dale H, Angevine CM, Krebs MP. Ordered membrane insertion of an archaeal opsin in vivo. Proceedings of the National Academy of Sciences of the United States of America. 2000, 97:7847-7852.
Delano MJ, Ward PA. The immune system's role in sepsis progression, resolution, and long-term outcome. Immunological Reviews. 2016, 274, 330-353.
Fukusaki E, Kato T, Maeda H, Kawazoe N, Ito Y, Okazawa A, Kajiyama S. Kobayashi A. DNA Aptamers that Bind to Chitin. Bioorganic & Medicinal Chemistry Letters. 2000. 423-425.
Gao J, Jeffries L, Mach KE, Craft DW, Thomas NJ, Gau V, Liao JC, Wong PK. A Multiplex Electrochemical Biosensor for Bloodstream Infection Diagnosis. Society for Laboratory Automation and Screening. 2017, 22:466-474.
Garidel P, Brandenburg, K. Current Understanding of Polymyxin B Applications in Bacteraemia:Sepsis Therapy Prevention: Clinical, Pharmaceutical, Structural and Mechanistic Aspects. Anti-Infective Agents in Medicinal Chemistry. 2009, 8, 367-385.
Grumaz S, Stevens P, Grumaz C, Decker SO, Weigand MA, Hofer S, Brenner T, Haeseler A, Sohn K. Next-generation sequencing diagnostics of bacteremia in septic patients. Genome Medicine 2016, 8 (1), 73.
Hsieh WS, Tsai YT, Chi WM, Wu HH. Epidemiology and Prevalence of Bloodstream Infections in a Regional Hospital in Northern Taiwan During 2008–2013. Journal of Experimental & Clinical Medicine 2014, 6:187-189.
Kurihara M, Sudo, Y. Microbial rhodopsins: wide distribution, rich diversity and great potential. Biophysics and Physicobiology. 2015, 12:121-129.
Kang SS, Sim JR, Yun CH, Han SH. Lipoteichoic acids as a major virulence factor causing inflammatory responses via Toll-like receptor 2. Archives of Pharmacal Research. 2016, 39, 1519-1529.
Lever A, Mackenzie I. Sepsis: definition, epidemiology, and diagnosis. British Medical Journal. 2007, 335:879-883.
Lu HC, Chen HM, Lin YS, Lin JW. A reusable and specific protein A‐coated
piezoelectric biosensor for flow injection immunoassay. Biotechnology Progress.
2000, 16 (1):116-124.
Matsuura M. Structural Modifications of Bacterial Lipopolysaccharide that Facilitate Gram-Negative Bacteria Evasion of Host Innate Immunity. Frontiers in Immunology. 2013, 4, 109.
Neutze R, Pebay-Peyroula E, Edman K, Royant A, Navarro J, Landau E. Bacteriorhodopsin: a high-resolution structural view of vectorial proton transport. Biochimica et Biophysica Acta. 2002.
Opota O, Croxatto A, Prod'hom G, Greub G. Blood culture-based diagnosis of bacteraemia: state of the art. Clinical Microbiology and Infection. 2015, 21:313-322.
Opota O, Jaton K, Greub G. Microbial diagnosis of bloodstream infection: towards molecular diagnosis directly from blood. Clinical Microbiology and Infection. 2015, 21:323-331.
Vincent JL, Abraham E. The last 100 years of sepsis. Journal of Respiratory and Critical Care Medicine. 2006, 173, 256-263.
Vincent JL, Abraham E. The last 100 years of sepsis. American Journal of Respiratory and Critical Care Medicine. 2006, 173:256-263.
Wang JP, Yoo SK, Song, L, El-Sayed MA. Molecular mechanism of the differential photoelectric response of bacteriorhodopsin. The Journal of Physical Chemistry B. 1997, 101:3420-3423.
Wang J. Vectorially oriented purple membrane: characterization by photocurrent measurement and polarized-Fourier transform infrared spectroscopy. Thin Solid Films. 2000, 379:224-229.
Warren HS, Fitting C, Hoff E, Adib-Conquy M, Beasley-Topliffe L, Tesini B, Liang X, Valentine C, Hellman J, Hayden D, Cavaillon JM. Resilience to bacterial infection: difference between species could be due to proteins in serum. The Journal of Infectious Diseases. 2010, 201, 223-232.
廖信銓. 微流體於細菌視紫質光電晶片製備之應用. 國立臺灣科技大學, 2015.
李晨鳳. 生物光電感測薄膜之初步研究. 國立臺灣科技大學, 2002.
黎閔哲. 即時檢測抗體及核酸適體於紫膜生物光電晶片上之固定化穩定性及開發大腸桿菌檢測晶片. 國立臺灣科技大學,2018.
陳冠辰. 適體-細菌視紫質生物光電感測晶片之探討. 國立臺灣科技大學, 2015.
吳欣穎. 細菌視紫質泛用型免疫光電晶片製備與原子力顯微鏡分析, 國立台灣科技大學化學工程研究所碩士論文, 2015.
鄭玉琳,林梅芳,蔡斌智. 嚴重敗血症治療概論, 2014.
賴美珠, 許國忠, 許啟森, 林金絲. 血流感染及血液培養之臨床意義, 2002.
衛生福利部疾病管制署.台灣院內感染監視資訊系統(TNIS系統)2018年第2季監視報告. (2018)12月14日.