(1) Koshti, R.; Mehta, L.; Samarth, N. Biological Recycling of Polyethylene Terephthalate: A Mini-Review. Journal of Polymers and the Environment 2018, 26 (8), 3520-3529. DOI: 10.1007/s10924-018-1214-7.
(2) Webb, H. K.; Arnott, J.; Crawford, R. J.; Ivanova, E. P. Plastic Degradation and Its Environmental Implications with Special Reference to Poly(ethylene terephthalate). Polymers 2013, 5 (1), 1-18.
(3) Thachnatharen, N.; Shahabuddin, S.; Sridewi, N. The Waste Management of Polyethylene Terephthalate (PET) Plastic Waste: A Review. IOP Conference Series: Materials Science and Engineering 2021, 1127 (1), 012002. DOI: 10.1088/1757-899X/1127/1/012002.
(4) Moharir, R. V.; Kumar, S. Challenges associated with plastic waste disposal and allied microbial routes for its effective degradation: A comprehensive review. Journal of Cleaner Production 2019, 208, 65-76. DOI: https://doi.org/10.1016/j.jclepro.2018.10.059.
(5) Huang, X.; Cao, L.; Qin, Z.; Li, S.; Kong, W.; Liu, Y. Tat-Independent Secretion of Polyethylene Terephthalate Hydrolase PETase in Bacillus subtilis 168 Mediated by Its Native Signal Peptide. Journal of Agricultural and Food Chemistry 2018, 66 (50), 13217-13227. DOI: 10.1021/acs.jafc.8b05038.
(6) Qi, X.; Ma, Y.; Chang, H.; Li, B.; Ding, M.; Yuan, Y. Evaluation of PET Degradation Using Artificial Microbial Consortia. Frontiers in Microbiology 2021, 12, Original Research. DOI: 10.3389/fmicb.2021.778828.
(7) PlasticsEurope. Plastics-the facts 2022: an analysis of global plastics production, demand and waste data; PlasricsEurope, Brussels, Belgium, 2022.
(8) INSIGHTS, F. B. Polyethylene Terephthalate (PET) Market Size, Share & Covid-19 Impact Analysis, By Type, Application, and Regional Forecast, 2023-2030. 2023. (accessed 2023.
(9) Barnard, E.; Rubio Arias, J. J.; Thielemans, W. Chemolytic depolymerisation of PET: a review. Green Chemistry 2021, 23 (11), 3765-3789, 10.1039/D1GC00887K. DOI: 10.1039/D1GC00887K.
(10) Müller, R.-J.; Kleeberg, I.; Deckwer, W.-D. Biodegradation of polyesters containing aromatic constituents. Journal of Biotechnology 2001, 86 (2), 87-95. DOI: https://doi.org/10.1016/S0168-1656(00)00407-7.
(11) Hiraga, K.; Taniguchi, I.; Yoshida, S.; Kimura, Y.; Oda, K. Biodegradation of waste PET. EMBO reports 2020, 21 (2), e49826.
(12) Maurya, A.; Bhattacharya, A.; Khare, S. K. Enzymatic Remediation of Polyethylene Terephthalate (PET)–Based Polymers for Effective Management of Plastic Wastes: An Overview. Frontiers in Bioengineering and Biotechnology 2020, 8, Review. DOI: 10.3389/fbioe.2020.602325.
(13) Yoshida, S.; Hiraga, K.; Takehana, T.; Taniguchi, I.; Yamaji, H.; Maeda, Y.; Toyohara, K.; Miyamoto, K.; Kimura, Y.; Oda, K. A bacterium that degrades and assimilates poly(ethylene terephthalate). Science 2016, 351 (6278), 1196-1199. DOI: doi:10.1126/science.aad6359.
(14) Chen, C.-C.; Han, X.; Ko, T.-P.; Liu, W.; Guo, R.-T. Structural studies reveal the molecular mechanism of PETase. The FEBS Journal 2018, 285 (20), 3717-3723. DOI: https://doi.org/10.1111/febs.14612.
(15) Son, H. F.; Cho, I. J.; Joo, S.; Seo, H.; Sagong, H.-Y.; Choi, S. Y.; Lee, S. Y.; Kim, K.-J. Rational Protein Engineering of Thermo-Stable PETase from Ideonella sakaiensis for Highly Efficient PET Degradation. ACS Catalysis 2019, 9 (4), 3519-3526. DOI: 10.1021/acscatal.9b00568.
(16) Son, H. F.; Joo, S.; Seo, H.; Sagong, H.-Y.; Lee, S. H.; Hong, H.; Kim, K.-J. Structural bioinformatics-based protein engineering of thermo-stable PETase from Ideonella sakaiensis. Enzyme and Microbial Technology 2020, 141, 109656. DOI: https://doi.org/10.1016/j.enzmictec.2020.109656.
(17) Seo, H.; Kim, S.; Son, H. F.; Sagong, H.-Y.; Joo, S.; Kim, K.-J. Production of extracellular PETase from Ideonella sakaiensis using sec-dependent signal peptides in E. coli. Biochemical and Biophysical Research Communications 2019, 508 (1), 250-255. DOI: https://doi.org/10.1016/j.bbrc.2018.11.087.
(18) Chen, Z.; Wang, Y.; Cheng, Y.; Wang, X.; Tong, S.; Yang, H.; Wang, Z. Efficient biodegradation of highly crystallized polyethylene terephthalate through cell surface display of bacterial PETase. Science of The Total Environment 2020, 709, 136138. DOI: https://doi.org/10.1016/j.scitotenv.2019.136138.
(19) Moog, D.; Schmitt, J.; Senger, J.; Zarzycki, J.; Rexer, K.-H.; Linne, U.; Erb, T.; Maier, U. G. Using a marine microalga as a chassis for polyethylene terephthalate (PET) degradation. Microbial Cell Factories 2019, 18 (1), 171. DOI: 10.1186/s12934-019-1220-z.
(20) Yafeng, S.; Jonas, M. N.; Dawei, Z.; *. Improving Protein Production on the Level of Regulation of both Expression and Secretion Pathways in Bacillus subtilis. J. Microbiol. Biotechnol. 2015, 25 (7), 963-977. DOI: 10.4014/jmb.1501.01028.
(21) Fu, G.; Liu, J.; Li, J.; Zhu, B.; Zhang, D. Systematic Screening of Optimal Signal Peptides for Secretory Production of Heterologous Proteins in Bacillus subtilis. Journal of Agricultural and Food Chemistry 2018, 66 (50), 13141-13151. DOI: 10.1021/acs.jafc.8b04183.
(22) Schallmey, M.; Singh A Fau - Ward, O. P.; Ward, O. P. Developments in the use of Bacillus species for industrial production. (0008-4166 (Print)). From 2004 Jan.
(23) Palmer, T. A.-O.; Stansfeld, P. J. Targeting of proteins to the twin-arginine translocation pathway. (1365-2958 (Electronic)). From 2020 May.
(24) Low, K. O.; Muhammad Mahadi, N.; Md. Illias, R. Optimisation of signal peptide for recombinant protein secretion in bacterial hosts. Applied Microbiology and Biotechnology 2013, 97 (9), 3811-3826. DOI: 10.1007/s00253-013-4831-z.
(25) Freudl, R. Signal peptides for recombinant protein secretion in bacterial expression systems. Microbial Cell Factories 2018, 17 (1), 52. DOI: 10.1186/s12934-018-0901-3.
(26) Tjalsma, H.; Bolhuis A Fau - Jongbloed, J. D.; Jongbloed Jd Fau - Bron, S.; Bron S Fau - van Dijl, J. M.; van Dijl, J. M. Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome. (1092-2172 (Print)). From 2000 Sep.
(27) Ribitsch, D.; Acero, E. H.; Przylucka, A.; Zitzenbacher, S.; Marold, A.; Gamerith, C.; Tscheließnig, R.; Jungbauer, A.; Rennhofer, H.; Lichtenegger, H.; et al. Enhanced Cutinase-Catalyzed Hydrolysis of Polyethylene Terephthalate by Covalent Fusion to Hydrophobins. Applied and Environmental Microbiology 2015, 81 (11), 3586-3592. DOI: doi:10.1128/AEM.04111-14.
(28) Wang, X.; Mao, J.; Chen, Y.; Song, D.; Gao, Z.; Zhang, X.; Bai, Y.; Saris, P. E. J.; Feng, H.; Xu, H.; et al. Design of antibacterial biointerfaces by surface modification of poly (ε-caprolactone) with fusion protein containing hydrophobin and PA-1. Colloids and Surfaces B: Biointerfaces 2017, 151, 255-263. DOI: https://doi.org/10.1016/j.colsurfb.2016.12.019.
(29) Niu, B.; Li, B.; Wang, H.; Guo, R.; Xu, H.; Qiao, M.; Li, W. Investigation of the relationship between the rodlet formation and Cys3–Cys4 loop of the HGFI hydrophobin. Colloids and Surfaces B: Biointerfaces 2017, 150, 344-351. DOI: https://doi.org/10.1016/j.colsurfb.2016.10.048.
(30) Zakeri, B.; Fierer, J. O.; Celik, E.; Chittock, E. C.; Schwarz-Linek, U.; Moy, V. T.; Howarth, M. Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin. Proceedings of the National Academy of Sciences 2012, 109 (12), E690-E697. DOI: doi:10.1073/pnas.1115485109.
(31) Han, X.; Liu, W.; Huang, J.-W.; Ma, J.; Zheng, Y.; Ko, T.-P.; Xu, L.; Cheng, Y.-S.; Chen, C.-C.; Guo, R.-T. Structural insight into catalytic mechanism of PET hydrolase. Nature Communications 2017, 8 (1), 2106. DOI: 10.1038/s41467-017-02255-z.
(32) Hirooka, K.; Tamano, A. Bacillus subtilis highly efficient protein expression systems that are chromosomally integrated and controllable by glucose and rhamnose. Bioscience, Biotechnology, and Biochemistry 2018, 82 (11), 1942-1954.
(33) Cui, W.; Han, L.; Suo, F.; Liu, Z.; Zhou, L.; Zhou, Z. Exploitation of Bacillus subtilis as a robust workhorse for production of heterologous proteins and beyond. World Journal of Microbiology and Biotechnology 2018, 34, 1-19.
(34) Choi, J.; Lee, S. Secretory and extracellular production of recombinant proteins using Escherichia coli. Applied microbiology and biotechnology 2004, 64, 625-635.
(35) Jeong, H.; Jeong, D.-E.; Park, S.-H.; Kim, S. J.; Choi, S.-K. Complete genome sequence of Bacillus subtilis strain WB800N, an extracellular protease-deficient derivative of strain 168. Microbiology Resource Announcements 2018, 7 (18), e01380-01318.
(36) Jan, J.; Valle, F.; Bolivar, F.; Merino, E. Characterization of the 5′ subtilisin (aprE) regulatory region from Bacillus subtilis. FEMS Microbiology Letters 2000, 183 (1), 9-14. DOI: 10.1111/j.1574-6968.2000.tb08926.x (acccessed 6/19/2023).(1) Koshti, R.; Mehta, L.; Samarth, N. Biological Recycling of Polyethylene Terephthalate: A Mini-Review. Journal of Polymers and the Environment 2018, 26 (8), 3520-3529. DOI: 10.1007/s10924-018-1214-7.
(2) Webb, H. K.; Arnott, J.; Crawford, R. J.; Ivanova, E. P. Plastic Degradation and Its Environmental Implications with Special Reference to Poly(ethylene terephthalate). Polymers 2013, 5 (1), 1-18.
(3) Thachnatharen, N.; Shahabuddin, S.; Sridewi, N. The Waste Management of Polyethylene Terephthalate (PET) Plastic Waste: A Review. IOP Conference Series: Materials Science and Engineering 2021, 1127 (1), 012002. DOI: 10.1088/1757-899X/1127/1/012002.
(4) Moharir, R. V.; Kumar, S. Challenges associated with plastic waste disposal and allied microbial routes for its effective degradation: A comprehensive review. Journal of Cleaner Production 2019, 208, 65-76. DOI: https://doi.org/10.1016/j.jclepro.2018.10.059.
(5) Huang, X.; Cao, L.; Qin, Z.; Li, S.; Kong, W.; Liu, Y. Tat-Independent Secretion of Polyethylene Terephthalate Hydrolase PETase in Bacillus subtilis 168 Mediated by Its Native Signal Peptide. Journal of Agricultural and Food Chemistry 2018, 66 (50), 13217-13227. DOI: 10.1021/acs.jafc.8b05038.
(6) Qi, X.; Ma, Y.; Chang, H.; Li, B.; Ding, M.; Yuan, Y. Evaluation of PET Degradation Using Artificial Microbial Consortia. Frontiers in Microbiology 2021, 12, Original Research. DOI: 10.3389/fmicb.2021.778828.
(7) PlasticsEurope. Plastics-the facts 2022: an analysis of global plastics production, demand and waste data; PlasricsEurope, Brussels, Belgium, 2022.
(8) INSIGHTS, F. B. Polyethylene Terephthalate (PET) Market Size, Share & Covid-19 Impact Analysis, By Type, Application, and Regional Forecast, 2023-2030. 2023. (accessed 2023.
(9) Barnard, E.; Rubio Arias, J. J.; Thielemans, W. Chemolytic depolymerisation of PET: a review. Green Chemistry 2021, 23 (11), 3765-3789, 10.1039/D1GC00887K. DOI: 10.1039/D1GC00887K.
(10) Müller, R.-J.; Kleeberg, I.; Deckwer, W.-D. Biodegradation of polyesters containing aromatic constituents. Journal of Biotechnology 2001, 86 (2), 87-95. DOI: https://doi.org/10.1016/S0168-1656(00)00407-7.
(11) Hiraga, K.; Taniguchi, I.; Yoshida, S.; Kimura, Y.; Oda, K. Biodegradation of waste PET. EMBO reports 2020, 21 (2), e49826.
(12) Maurya, A.; Bhattacharya, A.; Khare, S. K. Enzymatic Remediation of Polyethylene Terephthalate (PET)–Based Polymers for Effective Management of Plastic Wastes: An Overview. Frontiers in Bioengineering and Biotechnology 2020, 8, Review. DOI: 10.3389/fbioe.2020.602325.
(13) Yoshida, S.; Hiraga, K.; Takehana, T.; Taniguchi, I.; Yamaji, H.; Maeda, Y.; Toyohara, K.; Miyamoto, K.; Kimura, Y.; Oda, K. A bacterium that degrades and assimilates poly(ethylene terephthalate). Science 2016, 351 (6278), 1196-1199. DOI: doi:10.1126/science.aad6359.
(14) Chen, C.-C.; Han, X.; Ko, T.-P.; Liu, W.; Guo, R.-T. Structural studies reveal the molecular mechanism of PETase. The FEBS Journal 2018, 285 (20), 3717-3723. DOI: https://doi.org/10.1111/febs.14612.
(15) Son, H. F.; Cho, I. J.; Joo, S.; Seo, H.; Sagong, H.-Y.; Choi, S. Y.; Lee, S. Y.; Kim, K.-J. Rational Protein Engineering of Thermo-Stable PETase from Ideonella sakaiensis for Highly Efficient PET Degradation. ACS Catalysis 2019, 9 (4), 3519-3526. DOI: 10.1021/acscatal.9b00568.
(16) Son, H. F.; Joo, S.; Seo, H.; Sagong, H.-Y.; Lee, S. H.; Hong, H.; Kim, K.-J. Structural bioinformatics-based protein engineering of thermo-stable PETase from Ideonella sakaiensis. Enzyme and Microbial Technology 2020, 141, 109656. DOI: https://doi.org/10.1016/j.enzmictec.2020.109656.
(17) Seo, H.; Kim, S.; Son, H. F.; Sagong, H.-Y.; Joo, S.; Kim, K.-J. Production of extracellular PETase from Ideonella sakaiensis using sec-dependent signal peptides in E. coli. Biochemical and Biophysical Research Communications 2019, 508 (1), 250-255. DOI: https://doi.org/10.1016/j.bbrc.2018.11.087.
(18) Chen, Z.; Wang, Y.; Cheng, Y.; Wang, X.; Tong, S.; Yang, H.; Wang, Z. Efficient biodegradation of highly crystallized polyethylene terephthalate through cell surface display of bacterial PETase. Science of The Total Environment 2020, 709, 136138. DOI: https://doi.org/10.1016/j.scitotenv.2019.136138.
(19) Moog, D.; Schmitt, J.; Senger, J.; Zarzycki, J.; Rexer, K.-H.; Linne, U.; Erb, T.; Maier, U. G. Using a marine microalga as a chassis for polyethylene terephthalate (PET) degradation. Microbial Cell Factories 2019, 18 (1), 171. DOI: 10.1186/s12934-019-1220-z.
(20) Yafeng, S.; Jonas, M. N.; Dawei, Z.; *. Improving Protein Production on the Level of Regulation of both Expression and Secretion Pathways in Bacillus subtilis. J. Microbiol. Biotechnol. 2015, 25 (7), 963-977. DOI: 10.4014/jmb.1501.01028.
(21) Fu, G.; Liu, J.; Li, J.; Zhu, B.; Zhang, D. Systematic Screening of Optimal Signal Peptides for Secretory Production of Heterologous Proteins in Bacillus subtilis. Journal of Agricultural and Food Chemistry 2018, 66 (50), 13141-13151. DOI: 10.1021/acs.jafc.8b04183.
(22) Schallmey, M.; Singh A Fau - Ward, O. P.; Ward, O. P. Developments in the use of Bacillus species for industrial production. (0008-4166 (Print)). From 2004 Jan.
(23) Palmer, T. A.-O.; Stansfeld, P. J. Targeting of proteins to the twin-arginine translocation pathway. (1365-2958 (Electronic)). From 2020 May.
(24) Low, K. O.; Muhammad Mahadi, N.; Md. Illias, R. Optimisation of signal peptide for recombinant protein secretion in bacterial hosts. Applied Microbiology and Biotechnology 2013, 97 (9), 3811-3826. DOI: 10.1007/s00253-013-4831-z.
(25) Freudl, R. Signal peptides for recombinant protein secretion in bacterial expression systems. Microbial Cell Factories 2018, 17 (1), 52. DOI: 10.1186/s12934-018-0901-3.
(26) Tjalsma, H.; Bolhuis A Fau - Jongbloed, J. D.; Jongbloed Jd Fau - Bron, S.; Bron S Fau - van Dijl, J. M.; van Dijl, J. M. Signal peptide-dependent protein transport in Bacillus subtilis: a genome-based survey of the secretome. (1092-2172 (Print)). From 2000 Sep.
(27) Ribitsch, D.; Acero, E. H.; Przylucka, A.; Zitzenbacher, S.; Marold, A.; Gamerith, C.; Tscheließnig, R.; Jungbauer, A.; Rennhofer, H.; Lichtenegger, H.; et al. Enhanced Cutinase-Catalyzed Hydrolysis of Polyethylene Terephthalate by Covalent Fusion to Hydrophobins. Applied and Environmental Microbiology 2015, 81 (11), 3586-3592. DOI: doi:10.1128/AEM.04111-14.
(28) Wang, X.; Mao, J.; Chen, Y.; Song, D.; Gao, Z.; Zhang, X.; Bai, Y.; Saris, P. E. J.; Feng, H.; Xu, H.; et al. Design of antibacterial biointerfaces by surface modification of poly (ε-caprolactone) with fusion protein containing hydrophobin and PA-1. Colloids and Surfaces B: Biointerfaces 2017, 151, 255-263. DOI: https://doi.org/10.1016/j.colsurfb.2016.12.019.
(29) Niu, B.; Li, B.; Wang, H.; Guo, R.; Xu, H.; Qiao, M.; Li, W. Investigation of the relationship between the rodlet formation and Cys3–Cys4 loop of the HGFI hydrophobin. Colloids and Surfaces B: Biointerfaces 2017, 150, 344-351. DOI: https://doi.org/10.1016/j.colsurfb.2016.10.048.
(30) Zakeri, B.; Fierer, J. O.; Celik, E.; Chittock, E. C.; Schwarz-Linek, U.; Moy, V. T.; Howarth, M. Peptide tag forming a rapid covalent bond to a protein, through engineering a bacterial adhesin. Proceedings of the National Academy of Sciences 2012, 109 (12), E690-E697. DOI: doi:10.1073/pnas.1115485109.
(31) Han, X.; Liu, W.; Huang, J.-W.; Ma, J.; Zheng, Y.; Ko, T.-P.; Xu, L.; Cheng, Y.-S.; Chen, C.-C.; Guo, R.-T. Structural insight into catalytic mechanism of PET hydrolase. Nature Communications 2017, 8 (1), 2106. DOI: 10.1038/s41467-017-02255-z.
(32) Hirooka, K.; Tamano, A. Bacillus subtilis highly efficient protein expression systems that are chromosomally integrated and controllable by glucose and rhamnose. Bioscience, Biotechnology, and Biochemistry 2018, 82 (11), 1942-1954.
(33) Cui, W.; Han, L.; Suo, F.; Liu, Z.; Zhou, L.; Zhou, Z. Exploitation of Bacillus subtilis as a robust workhorse for production of heterologous proteins and beyond. World Journal of Microbiology and Biotechnology 2018, 34, 1-19.
(34) Choi, J.; Lee, S. Secretory and extracellular production of recombinant proteins using Escherichia coli. Applied microbiology and biotechnology 2004, 64, 625-635.
(35) Jeong, H.; Jeong, D.-E.; Park, S.-H.; Kim, S. J.; Choi, S.-K. Complete genome sequence of Bacillus subtilis strain WB800N, an extracellular protease-deficient derivative of strain 168. Microbiology Resource Announcements 2018, 7 (18), e01380-01318.
(36) Jan, J.; Valle, F.; Bolivar, F.; Merino, E. Characterization of the 5′ subtilisin (aprE) regulatory region from Bacillus subtilis. FEMS Microbiology Letters 2000, 183 (1), 9-14. DOI: 10.1111/j.1574-6968.2000.tb08926.x (acccessed 6/19/2023).
(37) Chen, J.; Gai, Y.; Fu, G.; Zhou, W.; Zhang, D.; Wen, J. Enhanced extracellular production of α-amylase in Bacillus subtilis by optimization of regulatory elements and over-expression of PrsA lipoprotein. Biotechnology Letters 2015, 37 (4), 899-906. DOI: 10.1007/s10529-014-1755-3.
(38) MURAYAMA, R.; AKANUMA, G.; MAKINO, Y.; NANAMIYA, H.; KAWAMURA, F. Spontaneous Transformation and Its Use for Genetic Mapping in Bacillus subtilis. Bioscience, Biotechnology, and Biochemistry 2004, 68 (8), 1672-1680. DOI: 10.1271/bbb.68.1672 (acccessed 6/19/2023).
(39) Wingfield, P. Protein precipitation using ammonium sulfate. (1934-3663 (Electronic)). From 2001 May.
(40) Kramer, R. M.; Shende Vr Fau - Motl, N.; Motl N Fau - Pace, C. N.; Pace Cn Fau - Scholtz, J. M.; Scholtz, J. M. Toward a molecular understanding of protein solubility: increased negative surface charge correlates with increased solubility. (1542-0086 (Electronic)). From 2012 Apr 18.
(41) Zhu, Y.; Wang, L.; Zheng, K.; Liu, P.; Li, W.; Lin, J.; Liu, W.; Shan, S.; Sun, L.; Zhang, H. Optimized Recombinant Expression and Characterization of Collagenase in Bacillus subtilis WB600. Fermentation 2022, 8 (9), 449.
(42) Puspitasari, N.; Tsai, S.-L.; Lee, C.-K. Class I hydrophobins pretreatment stimulates PETase for monomers recycling of waste PETs. International Journal of Biological Macromolecules 2021, 176, 157-164. DOI: https://doi.org/10.1016/j.ijbiomac.2021.02.026.